The Microbiome-Brain-Gut Connection + You

Feeling Stressed Out and Anxious? 

Before you go blaming rising covid numbers and your social media feed, you may want to take a closer look at the 39 trillion micro-organisms residing in your gut that are in constant dialogue with your brain and influencing your mood. Research shows that the community of microbes living inside your gut communicate with your central nervous system through neural, endocrine and immune pathways to regulate anxiety, depression, cognition, stress response, and disease. (1)(2)

Your Microbiome

Your ‘gut microbiome’ is made up of trillions of microorganisms and their genetic material that live in your intestinal tract. These microorganisms regulate functions vital to your overall health and wellbeing, including digestion, nutrient absorption, metabolism, body weight, immune function, brain health and psychological states. (2) (3) Our microbiota and its collective genomes actually provide us with genetic and metabolic attributes we have not evolved on our own, including the ability to synthesize vitamins from our food and make use of otherwise inaccessible nutrients and turn them into usable energy sources (4) (5) (6)  Your gut microbiota also produce thousands of metabolites that play key roles in every aspect of human health, including brain function and psychological states. Collectively, our microbiome weighs in around 3-5 pounds. But, don’t let their small size fool you. Without them we couldn’t survive. 

Although we establish a mostly stable, adult-like microbiome by the time we are three years old, our microbiome is mutable and highly responsive, for better or worse, to our lifestyle habits and environment. Things like diet, stress, sleep, pets, medications and home environment can alter your microbiome on a day to day, moment to moment basis. These changes in our microbial communities have an impact on both our physical and mental health. 

The Microbiome-Brain-Gut Connection + You

In the past, the brain was thought to be an immune privileged organ with a blood brain barrier that protected it from pathogens and immune responses that could damage neurons and neural connections. While it’s true that our blood-brain barrier works hard everyday to protect our brain and keep toxins out, our understanding of the brain as a privileged organ has changed. Studies show that microbial by-products and metabolites from our gut bacteria actually play a role in the development and function of the central nervous system, thereby setting us up for health or putting us at risk for certain diseases and psychological disorders, including anxiety and depression (7) (8)

Brain-Gut Chatter: How it Works

The brain and the gut communicate through a bidirectional network of signaling pathways called the gut-brain axis, with 80-90% of the signals starting in our gut.  (9)  Gut microbes influence and direct the flow of information from our gut to our central nervous system through the use of our immune system and the release of hormones, metabolites, toxins and signalng molecules. (10) 

Although most of the chatter originates in the gut and travels upwards, our brain also sends messages to our gut, letting it know what’s going on. Just thinking about eating a piece of fruit can get the stomach to release digestive juices in anticipation of that mouth-watering bite. (11)  

The central nervous system is also able to convey psychological stress to the gut through the release of stress hormones and inflammation. These messages can alter the communities of gut microbes and trigger an increase in pathogenic bacteria which, overtime, creates low grade, chronic inflammation from bacterial endotoxins. (12). Systemic inflammation can access the brain and trigger neurotoxic affects that affect basic brain cell function.

The Gut-Brain Axis + Mental Health: What the Studies Show

Studies comparing the microbiome of healthy individuals to individuals suffering with major depressive disorders showed that pro-inflammatory species of microbes reigned over beneficial bacteria in the guts of depressed individuals.( (13) In another more mundane study that most of us can relate to, researchers tracked the gut bacteria of healthy university students during a semester at school. During exam period, when the students’ stress levels soared, there was a downslide in the number of health-promoting bacteria present in their gut. (14) 

Stress and depression has also been shown to increase gut permeability, leading to leaky gut. a condition where the tight junctures in the intestinal wall are damaged, allowing bacteria, yeast and their end products to leak out into the bloodstream where they circulate and create an inflammatory response. Some of these bacteria are also able to cross the blood brain barrier and trigger inflammation in the brain. Evidence suggests a number of factors can contribute to leaky gut, including an overgrowth of bacteria in the small intestine.

The unhealthy feedback loop between the gut and the brain can lead to chronic brain inflammation seen in many psychological disorders, including depression, anxiety, personality disorders, and schizophrenia.(15)

Breaking it Down:

  1. Poor gut health negatively impacts brain health  

  2. Stress, depression and other psychological disorders negatively impact gut health. 

  3. Even short, mild episodes of stress can alter gut microbial balance and diversity, triggering a host of reactions that loop back to the central nervous system and impact emotional well-being. (16)

  4. The feedback loop between our gut and brain can support a healthy gut and brain or lead to dysbiosis, psychological distress and disease. It all depends on what signals and messages are being shared.

  5. Health promoting communication between gut bacteria and the central nervous system is vital for emotional health and well-being. 

  6. By improving our gut microbiome and actively working on how we manage stress, we can improve our overall health, brain function and mood.

 13 Actionable Tips for a Healthy Mind-Gut Connection:

  1. Eat more plants. Research shows that a whole food-plant-based diet, filled with a wide variety of fiber-rich, colorful vegetables, fruits, whole grains, legumes, nuts and seeds nourishes the beneficial bacteria in your gut and contributes to the diversity of the gut microbiome as a whole. (17)

  2. Eat a variety of plant foods: A diet composed of diverse and different plant foods, promotes gut diversity because different bacteria thrive on different polyphenols and fiber. 

  3. Fiber first: Gut microbes produce anti-inflammatory short-chain fatty acids (SCFAs) through the fermentation of indigestible dietary fiber and resistant starch. SCAFs have anti-inflammatory properties, protect against leaky gut, nourish good bacteria and protect immune cells. Eating fiber encourages the growth of  beneficial bacteria, keeping pathogenic bacteria at bay. (18)

  4. Eat the rainbow: Polyphenols give plant food their color.  Research suggests that polyphenols have a positive impact on gut metabolism and immunity and confer anti-inflammatory properties. (19)

  5. Limit foods high in sugar, artificial sweeteners, and refined carbohydrates: These foods nourish the bad gut bacteria and can lead to dysbiosis. (20) 

  6. Reduce your consumption of saturated fats and animal protein. Diets rich in animal protein have been shown to compromise the health and diversity of your gut microbiome, so reducing your consumption of animal products can be helpful too,( 21)

  7. Add fermented foods to your plate: Fermented foods like kimchi, miso and kefir are a natural source of probiotics (good bacteria).

  8. Sleep better: Microbiome diversity and beneficial bacteria are associated with increased sleep quality. A good night’s rest reduces anxiety, boosts mood and makes us better able to handle our stress.(22)

  9. Move more: Exercise improves mood and stress and reduces symptoms of depression and anxiety. Research also suggests that exercise improves inflammation, protects against leaky gut and has a positive impact on the composition of our gut microbiota and their metabolites. (23)

  10.  Breathe: Deep, slow breathing activates the parasympathetic nervous system, helping us to feel calm, present and relaxed. Try these breathing techniques to bust stress and feel better.

  11. Practice daily gratitude: Tracking and acknowledging all the positive things in your life, from a morning coffee or beautiful sunrise, helps reduce stress and create a more positive mindset.

  12. Go outside: Spending time in nature is a known stress-buster and mood elixir.

  13. Make time for friends and family: Social connection lowers stress and anxiety and increases resilience and self-esteem.

Last Thoughts:

Like all great relationships, the microbiome-gut-brain axis requires strong, healthy communication to thrive. Eating well, sleeping well, managing stress, moving regularly, spending time in nature and cultivating a positive mindset is the love language of your microbiome-gut-brain axis. Putting these healthy habits into rotation can help you cultivate positive mental health, resilience and a more optimistic outlook on life.


Gut Health: What you Need to Know

Imagine your gut microbiome is an ecosystem. Geographically, it encompasses the entirety of your intestinal tract, beginning at your mouth and ending at your anus. Inside this ecosystem lives a bustling, highly diverse community of 39 trillion microbes (microbiota). The collective genomes of the trillions of microorganisms colonizing your gut in your gut microbiome

Most of the inhabitants in your gut ecosystem are bacteria. They account for  90 percent of the microbial population and are made up of over 1000 species.  Living right alongside your gut bacteria are archaea, ancient microbes that inhabited this planet 4 billion years ago , parasites, multicellular fungi, and viruses. These microorganisms populate every part of your intestinal tract, but you will find them in greatest density inside the dark recesses of your colon. Collectively, they weigh between 3-5 pounds, around the weight of your brain! Their  impact on human health is so powerful that researchers now consider your gut microbiome an organ in its own right. (1)

Sounds like a Sci-fi Movie, right? 

Don’t worry. Our gut microbiota have co-evolved with us over millions of years to form a complex and mutually beneficial relationship in which we provide them with food and shelter and they pay us back by contributing to our biology in meaningful and essential ways. 

Our gut microbiome actually plays an important role in all areas of our health, including digestion, immunity, hormone balance, metabolism, cognition, mood, circadian rhythm, gene expression and more. (2) (3) In fact, research shows our microbiota and its collective genomes actually provide us with genetic and metabolic attributes we have not evolved on our own, including the ability to synthesize vitamins and make use of otherwise inaccessible nutrients from food and turn them into usable energy sources (4) (5) (6)  

Long story short, we are in a co-dependent relationship with our gut microbiome.

Maintaining Balance and Harmony in the Gut

Like all natural ecosystems, each microorganism in your gut microbiome plays a specific role and does its part to ensure the balance and health of the system as a whole. When microbial diversity is strong and the proportions of bacterial species are in balance, gut microbes live together in harmony, protecting the integrity of the intestinal wall and contributing to all aspects of human health and well-being. When diversity, function and composition is compromised,  there is an imbalance of healthy to unhealthy microbes that leads to dysbiosis and chronic illness, including inflammatory bowel diseases (IBD), irritable bowel syndrome (IBS), diabetes, obesity, autoimmune disease, cancer, cardiovascular and central nervous system disorders and more(6)(7) 

Protecting the Harmony of our Gut Microbiome

Although we establish a mostly stable, adult-like microbiome by the time we are three, our microbiome is mutable and highly responsive to our lifestyle habits and environment. Things like diet, stress, sleep, pets, medications and home environment can alter your microbiome on a day to day, or even minute to minute basis (8). While many lifestyle factors can influence the composition and diversity of our gut microbiome, it appears that the community structure and activity of microorganisms in the gut responds most quickly to our food choices.(9)

Studies show that specific gut microbes are associated with specific nutrients, foods, and dietary patterns, meaning every food choice you make has the power to nourish a specific group of microbes and starve out another. Comparing the gut microbiomes of rural Hadza hunter gatherers from Tanzania to urban Italian populations, researchers found that the Hazda, who enjoy a diet rich in complex carbohydrates, have increased microbiota biodiversity and enrichment of healthy gut bacteria compared to the populations from industrialized Italy, who have reduced microbiome stability and diversity. (10)  

Since the composition and balance of our microbiome is largely determined by our food choices, consuming foods that amplify the healthy populations of beneficial bacteria and add to the overall diversity of our microbial populations is a key consideration when deciding what to put on your plate.

So What Should You Be Eating?

Plants, Plants and More Plants!  

Healthy gut microbes love fiber and polyphenol rich foods. Where do you find fiber and polyphenols? Exclusively in plants.

Research shows that a whole food-plant-based diet, filled with a wide variety of fiber-rich, colorful vegetables, fruits, whole grains, legumes, nuts and seeds nourishes the beneficial bacteria in your gut and contributes to the diversity of the gut microbiome as a whole. (12) Conversely, diets high in animal proteins, saturated fats, sugar, artificial sweeteners, and refined carbohydrates nourish the bad gut bacteria. When bad bacteria flourish, they kill off helpful microbes and throw off the balance of your microbiome. Imbalance in the gut microbiota has been linked with gastrointestinal conditions such as reflux and inflammatory bowel disease as well as systemic conditions such as obesity, atherosclerosis, type 2 diabetes, cancer, Alzheimer's and Parkinson's disease, autism spectrum disorder, allergies and more. (12)(13) When it comes to our microbiome, variety may be as important as the quantities of plant foods on our plate. Plant foods are composed of different kinds of fiber and phytochemicals which support different microbial species. Since diversity is key to a healthy microbiome, you will want to challenge yourself to not just eat more plants, but new and different types of plants too. 

What Should you be Limiting in your Diet?

Highly processed foods and carbohydrates, added sugars, saturated fats and artificial sweeteners. Studies how that long-term consumption of these foods can lead to the extinction of several classes of the gut microbiota and create dysbiosis in your gut, triggering chronic disease, autoimmunity and gastrointestinal illnesses.  (12)(13) Diets too high in animal protein have also been shown to compromise the health and diversity of your gut microbiome, so reducing your consumption of animal products can be helpful too, (14)

Actionable Takeaways for a Healthy Gut and a Healthy You

  • You can shape your gut microbiota and take an active role in your health.

  • Your gut microbiota is highly responsive to your food choices. Be strategic. 

  • When you control your food choices, you control the composition of your gut microbiome which means you control your health.

  • Eat more plants. At every meal ask yourself, “How can I get more plants on my plate?” 

  • Try new and different plant foods: A diet composed of diverse and different plant foods, promotes gut diversity which, in turn, promotes health.

  • Eat the rainbow: Polyphenols give plant food their color.  

  • Limit or avoid processed foods and carbohydrates, added sugars, saturated fats, artificial sweeteners

  • Reduce your consumption of animal proteins.

Hope you found this second post in our microbiome series interesting. Next week we will take a deeper dive into the specific foods and nutrients that nourish your microbiome and keep you healthy.

 


What the Heck is the Microbiome and Why Should You Care

By now you’ve probably heard the term microbiome and know it has something to do with human health? But what is the microbiome, exactly?  Why is it getting so much attention? And, what can we learn from it? In this four part series on the Microbiome, we will unpack these questions and more, helping you to take charge of your health and well-being.

Hope you follow along!

MICROBIOME 101: A Primer

Did you know that at this very minute you are hosting an invisible army of 39 trillion micro-organisms in and on our body. Yep, 39 trillion - that’s 10 times the number of stars in our galaxy!  The key players in this microbial arsenal are bacteria, but right alongside them are archea, eurkaryotes, and even viruses, each one doing its part to help you to maintain homeostasis and stay healthy. This bustling community of microscopic bugs, collectively known as your microbiota, reside mostly in the gastrointestinal tract, but they also live in the nasal passages, lungs, vaginal opening, and on your skin. (1)

hand and laster cut microbes by Rogan Brown

All told, your microbiota weighs in at 3-5 pounds and accounts for more than half the number of cells in your body, meaning you have more microbial cells than human cells!  And, if that didn’t get your attention, this will: In terms of our genetic code, we are only 1% human: While the human genome - the complete set of genetic instructions for a human being - consists of around 23,000 genes, our microbiome encodes over 3 million genes that produce thousands of metabolites essential to human health and homeostasis. In fact, studies show that the microbes living in and on our body actually provide us with genetic variation and gene functions that our own human cells are not evolved to do! (2) In short, we are in a symbiotic relationship with our microbiota: When we take care of them and give them the proper food and shelter, they take care of us. When we don’t, we put these communities and ourselves at risk for dysbiosis and disease. (3) 

Are we Human?

In the past we would have thought of ourselves as autonomous, unitary individuals, but now one could argue that we are heliobionts or superorganisms, made-up of the host (in this case, us) and the 39 trillion bugs that colonize our body and perform functions essential for our survival. (4) The interaction between our human and non-human elements is what actually makes us who we are. (5) 

What is the Microbiome?

The Microbiome is the total genetic material of the microorganisms within the human body. (6) When talking about the microbiome, it’s important to remember that each area of the human body houses its own unique population of microbial residents that are best suited to live there. The composition of microbes and the kinds of genes they have are habitat-specific, for example you will find different species of microbes lining your intestinal wall than you will find sitting on your arm. (7)

What does our Microbiota Do? 

Beneficial microorganisms live in harmony with us and perform functions vital for human health and survival. Our microbiota plays an integral role in digestion, nutrient extraction and elimination, as well as immune function, metabolism, brain health, mood regulation, skin and wound healing and weight management. The better question to ask is what doesn’t our microbiota do!

How do we get our Microbiota?

Your microbiome begins to develop even before you are born. We are first exposed to microorganisms in the womb, as bacteria from the mother makes its way through to the uterus to the developing fetus. Colonization continues as the baby moves through the birth canal, enjoys some skin to skin contact with its mother and takes its first sip of bacteria rich breast milk. The mother’s microbiome largely determines which species of microorganisms the baby will first encounter in the early stages of building its own microbiome. (8)  As the baby grows, diet and environmental factors, such as exposure to pets, home environment and medications, come into play and help shape the developing microbiome. By the time a child reaches 3 years of age, they will have established a mostly stable, adult-like microbiome, but, in later life, there is a dip in gut microbiota diversity that is tied to age related disease and frailty(9)

Big Takeaway:

The microbiome is a living, breathing life force that is essential for human health, well-being and survival. Though relatively stable from age three, our microbiome is mutable and responsive to our lifestyle choices and habits. When we eat well, get enough sleep, manage stress, and move our bodies, we take an active role in shaping and maintaining our gut microbiota throughout our lifetime, empowering us to live a healthy, beautiful, long life. (10)

In the coming weeks, we will explore how you can use different lifestyle interventions to optimize your microbiota to promote long term health and well-being. 

Hope to see you there!